- bufferThe buffer this compute is writing to
C++ Type:std::string
Controllable:No
Description:The buffer this compute is writing to
SwiftHohenbergLinear
Reciprocal space linear term in the semi-implicit time integration of the Swift-Hohenberg equation IC.
Fills a tensor with
where is the k-vector. This is the Fourier transform of the linear term in the Swift-Hohenberg equation.
Example Input File Syntax
[TensorComputes<<<{"href": "../../syntax/TensorComputes/index.html"}>>>]
[Initialize<<<{"href": "../../syntax/TensorComputes/Initialize/index.html"}>>>]
[linear]
type = SwiftHohenbergLinear<<<{"description": "Reciprocal space linear term in the semi-implicit time integration of the Swift-Hohenberg equation IC.", "href": "SwiftHohenbergLinear.html"}>>>
buffer<<<{"description": "The buffer this compute is writing to"}>>> = linear
alpha<<<{"description": "Regularization factor <=1"}>>> = 1
r<<<{"description": "Phase field crystal parameter r"}>>> = 0.025
[]
[]
[]Input Parameters
- alpha1Regularization factor <=1
Default:1
C++ Type:double
Unit:(no unit assumed)
Controllable:No
Description:Regularization factor <=1
- r-0.5Phase field crystal parameter r
Default:-0.5
C++ Type:double
Unit:(no unit assumed)
Controllable:No
Description:Phase field crystal parameter r
Optional Parameters
- control_tagsAdds user-defined labels for accessing object parameters via control logic.
C++ Type:std::vector<std::string>
Controllable:No
Description:Adds user-defined labels for accessing object parameters via control logic.
- enableTrueSet the enabled status of the MooseObject.
Default:True
C++ Type:bool
Controllable:No
Description:Set the enabled status of the MooseObject.
Advanced Parameters
Input Files
(test/tests/tensor_compute/rotating_grain_secant.i)
w=6
[Domain]
dim = 2
nx = 40
ny = 40
xmax = ${fparse w*pi*2}
ymax = ${fparse w*pi*2/sin(pi/3)}
mesh_mode = DOMAIN
[]
[AuxVariables]
[phi]
[]
[]
[Outputs]
exodus = false
[]
[TensorBuffers]
[psi]
map_to_aux_variable = phi
[]
[psibar]
[]
[psi3]
[]
[psi3bar]
[]
# constant tensors
[linear]
[]
[]
crystal = '-(sin(sin(a)*y/2+cos(a)*x/2)^2 + sin(sin(a+1/3*pi)*y/2+cos(a+1/3*pi)*x/2)^2 + sin(sin(a-1/3*pi)*y/2+cos(a-1/3*pi)*x/2)^2 - 1.5)*0.25'
[Functions]
[grain1]
type = ParsedFunction
expression = 'a := 0; ${crystal}'
[]
[grain2]
type = ParsedFunction
expression = 'a := 0.95; ${crystal}'
[]
[domain]
type = ParsedFunction
expression = 'r := (x-${w}*pi)^2+(y-${w}*pi)^2; if(r<(${w}*2/3*pi)^2, grain2, grain1)'
symbol_names = 'grain1 grain2'
symbol_values = 'grain1 grain2'
[]
[]
[TensorComputes]
[Initialize]
[psi]
type = MooseFunctionTensor
buffer = psi
function = domain
[]
[linear]
type = SwiftHohenbergLinear
buffer = linear
alpha = 1
r = 0.025
[]
[]
[Solve]
[psi3]
type = ParsedCompute
buffer = psi3
expression = "0.20*psi^2-psi^3"
inputs = psi
[]
[psibar]
type = ForwardFFT
buffer = psibar
input = psi
[]
[psi3bar]
type = ForwardFFT
buffer = psi3bar
input = psi3
[]
[]
[]
[TensorSolver]
type = SecantSolver
buffer = psi
substeps = 3
reciprocal_buffer = psibar
linear_reciprocal = linear
nonlinear_reciprocal = psi3bar
[]
[Problem]
type = TensorProblem
[]
[Executioner]
type = Transient
num_steps = 10
[TimeStepper]
type = TensorSolveIterationAdaptiveDT
dt = 1
max_iterations = 400
min_iterations = 100
growth_factor = 1.4
cutback_factor = 0.9
[]
dtmax = 500
[]
[TensorOutputs]
[xdmf]
type = XDMFTensorOutput
buffer = 'psi'
enable_hdf5 = true
# Do not transpose output to avoid regolding the test. In practice the default
# of transpose = true should always be used
transpose = false
[]
[]
(test/tests/tensor_compute/rotating_grain_secant.i)
w=6
[Domain]
dim = 2
nx = 40
ny = 40
xmax = ${fparse w*pi*2}
ymax = ${fparse w*pi*2/sin(pi/3)}
mesh_mode = DOMAIN
[]
[AuxVariables]
[phi]
[]
[]
[Outputs]
exodus = false
[]
[TensorBuffers]
[psi]
map_to_aux_variable = phi
[]
[psibar]
[]
[psi3]
[]
[psi3bar]
[]
# constant tensors
[linear]
[]
[]
crystal = '-(sin(sin(a)*y/2+cos(a)*x/2)^2 + sin(sin(a+1/3*pi)*y/2+cos(a+1/3*pi)*x/2)^2 + sin(sin(a-1/3*pi)*y/2+cos(a-1/3*pi)*x/2)^2 - 1.5)*0.25'
[Functions]
[grain1]
type = ParsedFunction
expression = 'a := 0; ${crystal}'
[]
[grain2]
type = ParsedFunction
expression = 'a := 0.95; ${crystal}'
[]
[domain]
type = ParsedFunction
expression = 'r := (x-${w}*pi)^2+(y-${w}*pi)^2; if(r<(${w}*2/3*pi)^2, grain2, grain1)'
symbol_names = 'grain1 grain2'
symbol_values = 'grain1 grain2'
[]
[]
[TensorComputes]
[Initialize]
[psi]
type = MooseFunctionTensor
buffer = psi
function = domain
[]
[linear]
type = SwiftHohenbergLinear
buffer = linear
alpha = 1
r = 0.025
[]
[]
[Solve]
[psi3]
type = ParsedCompute
buffer = psi3
expression = "0.20*psi^2-psi^3"
inputs = psi
[]
[psibar]
type = ForwardFFT
buffer = psibar
input = psi
[]
[psi3bar]
type = ForwardFFT
buffer = psi3bar
input = psi3
[]
[]
[]
[TensorSolver]
type = SecantSolver
buffer = psi
substeps = 3
reciprocal_buffer = psibar
linear_reciprocal = linear
nonlinear_reciprocal = psi3bar
[]
[Problem]
type = TensorProblem
[]
[Executioner]
type = Transient
num_steps = 10
[TimeStepper]
type = TensorSolveIterationAdaptiveDT
dt = 1
max_iterations = 400
min_iterations = 100
growth_factor = 1.4
cutback_factor = 0.9
[]
dtmax = 500
[]
[TensorOutputs]
[xdmf]
type = XDMFTensorOutput
buffer = 'psi'
enable_hdf5 = true
# Do not transpose output to avoid regolding the test. In practice the default
# of transpose = true should always be used
transpose = false
[]
[]
(examples/swift_hohenberg/swifthohenberg.i)
#
# Solve a simple Swift-Hohenberg crystal phase field problem. The initial condition is
# a random melt, which crystalizes out.
#
[Domain]
dim = 2
nx = 400
ny = 400
xmax = ${fparse pi*2*30}
ymax = ${fparse pi*2*30}
device_names = 'cuda'
mesh_mode = DOMAIN
[]
[TensorBuffers]
[psi]
map_to_aux_variable = psi
[]
[psibar]
[]
[psi3]
[]
[psi3bar]
[]
# constant tensors
[linear]
[]
# output
[filter]
map_to_aux_variable = filter
[]
[filterbar]
[]
[]
[AuxVariables]
[psi]
[]
[filter]
[]
[]
[TensorComputes]
[Initialize]
[psi]
type = RandomTensor
buffer = psi
min = 0
max = 0.07
[]
[linear]
type = SwiftHohenbergLinear
buffer = linear
alpha = 1
r = 0.025
[]
[]
[Solve]
[psi3]
type = ParsedCompute
buffer = psi3
expression = "0.20*psi^2-psi^3"
inputs = psi
[]
[psibar]
type = ForwardFFT
buffer = psibar
input = psi
[]
[psi3bar]
type = ForwardFFT
buffer = psi3bar
input = psi3
[]
[]
[Postprocess]
[low_pass]
type = ParsedCompute
buffer = filterbar
extra_symbols = true
expression = 'psibar * exp(-k2*10)'
inputs = psibar
[]
[filter]
type = InverseFFT
buffer = filter
input = filterbar
[]
[]
[]
[TensorTimeIntegrators]
[c]
type = FFTSemiImplicit
buffer = psi
reciprocal_buffer = psibar
linear_reciprocal = linear
nonlinear_reciprocal = psi3bar
[]
[]
[Problem]
type = TensorProblem
spectral_solve_substeps = 1000
[]
[Executioner]
type = Transient
num_steps = 300
[TimeStepper]
type = IterationAdaptiveDT
growth_factor = 1.2
dt = 10
[]
dtmax = 1000
[]
[Postprocessors]
[min_psi]
type = TensorExtremeValuePostprocessor
buffer = psi
value_type = MIN
execute_on = 'TIMESTEP_END'
[]
[max_psi]
type = TensorExtremeValuePostprocessor
buffer = psi
value_type = MAX
execute_on = 'TIMESTEP_END'
[]
[Psi]
type = TensorIntegralPostprocessor
buffer = psi
[]
[]
[TensorOutputs]
[xdmf]
type = XDMFTensorOutput
buffer = 'psi'
output_mode = 'Node'
enable_hdf5 = true
[]
[]
[Outputs]
exodus = true
perf_graph = true
execute_on = 'TIMESTEP_END'
[]
(test/tests/tensor_compute/parallel.i)
[Domain]
device_names = "cuda:1 cuda:0 cpu"
device_weights = "10 10 1"
parallel_mode = FFT_SLAB
dim = 2
nx = 400
ny = 400
xmax = ${fparse pi*2*30}
ymax = ${fparse pi*2*30}
[]
# [Mesh]
# type = GeneratedMesh
# dim =1
# []
[TensorBuffers]
[psi]
# map_to_aux_variable = psi
[]
[psibar]
[]
[psi3]
[]
[psi3bar]
[]
# constant tensors
[linear]
[]
# output
[filter]
# map_to_aux_variable = filter
[]
[filterbar]
[]
[]
[AuxVariables]
[psi]
[]
[filter]
[]
[]
[TensorComputes]
[Initialize]
[psi]
type = RandomTensor
buffer = psi
min = 0
max = 0.07
[]
[linear]
type = SwiftHohenbergLinear
buffer = linear
alpha = 1
r = 0.025
[]
[]
[Solve]
[psi3]
type = ParsedCompute
buffer = psi3
expression = "0.20*psi^2-psi^3"
inputs = psi
[]
[psibar]
type = ForwardFFT
buffer = psibar
input = psi
[]
[psi3bar]
type = ForwardFFT
buffer = psi3bar
input = psi3
[]
[]
[Postprocess]
[low_pass]
type = ParsedCompute
buffer = filterbar
extra_symbols = true
expression = 'psibar * exp(-k2*10)'
inputs = psibar
[]
[filter]
type = InverseFFT
buffer = filter
input = filterbar
[]
[]
[]
[TensorTimeIntegrators]
[c]
type = FFTSemiImplicit
buffer = psi
reciprocal_buffer = psibar
linear_reciprocal = linear
nonlinear_reciprocal = psi3bar
[]
[]
[Problem]
type = TensorProblem
spectral_solve_substeps = 1000
[]
[Executioner]
type = Transient
num_steps = 300
[TimeStepper]
type = IterationAdaptiveDT
growth_factor = 1.2
dt = 10
[]
dtmax = 1000
[]
[Postprocessors]
[min_psi]
type = TensorExtremeValuePostprocessor
buffer = psi
value_type = MIN
execute_on = 'TIMESTEP_END'
[]
[max_psi]
type = TensorExtremeValuePostprocessor
buffer = psi
value_type = MAX
execute_on = 'TIMESTEP_END'
[]
[Psi]
type = TensorIntegralPostprocessor
buffer = psi
[]
[]
# [TensorOutputs]
# [xdmf]
# type = XDMFTensorOutput
# buffer = 'psi'
# output_mode = 'Node'
# enable_hdf5 = true
# []
# []
[Outputs]
exodus = true
perf_graph = true
execute_on = 'TIMESTEP_END'
[]
(examples/swift_hohenberg/rotating_grain.i)
#
# Solve a simple Swift-Hohenberg crystal phase field problem. The initial condition is
# a circular grain that is rotated against the surropunding matrix.
# This example demonstrates the use of the [TensorComputes/Postprocess] system to perform
# compute steps just prior to running the output objects. Here we perform a low-pass filtering
# by forward transfroming the psi amplitude field into frequency space, attenuating frequencies
# by the exponent of their wave number, and transforming back into real space. This filtering
# makes the dislocation structure in the crystal more pronounced in the visualization.
#
w=60
[Domain]
dim = 2
nx = 400
ny = 400
xmax = ${fparse pi*2*w}
ymax = ${fparse pi*2*w}
device_names = 'cuda'
mesh_mode = DOMAIN
[]
[TensorBuffers]
[psi]
map_to_aux_variable = psi
[]
[psibar]
[]
[psi3]
[]
[psi3bar]
[]
# constant tensors
[linear]
[]
# output
[filter]
map_to_aux_variable = filter
[]
[filterbar]
[]
[]
[AuxVariables]
[psi]
[]
[filter]
[]
[]
crystal = '-sin(sin(a)*y/2+cos(a)*x/2)^2*sin(sin(a+1/3*pi)*y/2+cos(a+1/3*pi)*x/2)^2*sin(sin(a-1/3*pi)*y/2+cos(a-1/3*pi)*x/2)^2'
[Functions]
[grain1]
type = ParsedFunction
expression = 'a := 0; ${crystal}'
[]
[grain2]
type = ParsedFunction
expression = 'a := 0.95; ${crystal}'
[]
[domain]
type = ParsedFunction
expression = 'r := (x-${w}*pi)^2+(y-${w}*pi)^2; if(r<(${w}*2/3*pi)^2, grain2, grain1)'
symbol_names = 'grain1 grain2'
symbol_values = 'grain1 grain2'
[]
[]
[TensorComputes]
[Initialize]
[psi]
type = MooseFunctionTensor
buffer = psi
function = domain
[]
[linear]
type = SwiftHohenbergLinear
buffer = linear
alpha = 1
r = 0.025
[]
[]
[Solve]
[psi3]
type = ParsedCompute
buffer = psi3
expression = "0.20*psi^2-psi^3"
inputs = psi
[]
[psibar]
type = ForwardFFT
buffer = psibar
input = psi
[]
[psi3bar]
type = ForwardFFT
buffer = psi3bar
input = psi3
[]
[]
[Postprocess]
[low_pass]
type = ParsedCompute
buffer = filterbar
extra_symbols = true
expression = 'psibar * exp(-k2*10)'
inputs = psibar
[]
[filter]
type = InverseFFT
buffer = filter
input = filterbar
[]
[]
[]
[TensorSolver]
type = AdamsBashforthMoulton
buffer = psi
reciprocal_buffer = psibar
linear_reciprocal = linear
nonlinear_reciprocal = psi3bar
substeps = 100
[]
[Problem]
type = TensorProblem
[]
[Executioner]
type = Transient
num_steps = 120
[TimeStepper]
type = IterationAdaptiveDT
growth_factor = 1.1
dt = 5
[]
dtmax = 500
[]
[Postprocessors]
[min_psi]
type = TensorExtremeValuePostprocessor
buffer = psi
value_type = MIN
execute_on = 'TIMESTEP_END'
[]
[max_psi]
type = TensorExtremeValuePostprocessor
buffer = psi
value_type = MAX
execute_on = 'TIMESTEP_END'
[]
[Psi]
type = TensorIntegralPostprocessor
buffer = psi
[]
[]
[Outputs]
exodus = true
perf_graph = true
execute_on = 'TIMESTEP_END'
[]